1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g16790.1

LOC_Os08g16790.1 (LOC_Os08g16790)


Aliases : LOC_Os08g16790

Description : no hits & (original description: none)


Gene families : OG0000522 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g16790.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00148130 evm_27.TU.AmTr_v1... Myosin-binding protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g052531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0024.g020308 No alias not classified & original description: CDS=1-2553 0.04 OrthoFinder output from all 47 species
Dde_g07292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g06810.1 LOC_Os07g06810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g26123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22455 No alias MyoB class-IIb myosin receptor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005936_P001 Zm00001e005936 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011892_P001 Zm00001e011892 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007656 GTD-bd 13 102
No external refs found!