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  5. LOC_Os08g15230.1

LOC_Os08g15230.1 (LOC_Os08g15230)


Aliases : LOC_Os08g15230

Description : SMXL strigolactone signal transducer


Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g15230.1

Target Alias Description ECC score Gene Family Method Actions
Nbi_g06813 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g08821 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000513 No alias not classified & original description: CDS=1-2706 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020044 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g53546 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e008174_P001 Zm00001e008174 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Zm00001e014748_P001 Zm00001e014748 SMXL strigolactone signal transducer 0.02 OrthoFinder output from all 47 species
Zm00001e039910_P002 Zm00001e039910 SMXL strigolactone signal transducer 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 24 55
IPR004176 Clp_R_dom 149 186
No external refs found!