- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os08g11040
Description : no hits & (original description: none)
Gene families : OG0002408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002408_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g11040.1 | |
| Cluster | HCCA: Cluster_125 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g64510.1 | LOC_Os01g64510 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os03g32690.1 | LOC_Os03g32690 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g07680.1 | LOC_Os04g07680 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g11290.1 | LOC_Os04g11290 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os04g29200.1 | LOC_Os04g29200 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g13910.1 | LOC_Os05g13910 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os05g14610.1 | LOC_Os05g14610 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g11130.1 | LOC_Os08g11130 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g11190.1 | LOC_Os08g11190 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g01870.1 | LOC_Os10g01870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g14750.1 | LOC_Os11g14750 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g17090.1 | LOC_Os11g17090 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g29890.1 | LOC_Os11g29890 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g10000.1 | LOC_Os12g10000 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os12g11490.1 | LOC_Os12g11490 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g14860.1 | LOC_Os12g14860 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |