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  5. LOC_Os08g10560.1

LOC_Os08g10560.1 (NF-YC2, ATHAP5B,...)


Aliases : NF-YC2, ATHAP5B, HAP5B, LOC_Os08g10560

Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g10560.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Aob_g01184 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Solyc03g111450.3.1 HAP5A, NF-YC1,... component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e039944_P001 NF-YC2, ATHAP5B,... component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 69 118
IPR003958 CBFA_NFYB_domain 381 443
No external refs found!