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LOC_Os08g10030.1 (LOC_Os08g10030)


Aliases : LOC_Os08g10030

Description : KH domain-containing protein At4g18375 OS=Arabidopsis thaliana (sp|p58223|y4837_arath : 241.0)


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g10030.1
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00116010 evm_27.TU.AmTr_v1... KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G51580 No alias RNA-binding KH domain-containing protein 0.05 OrthoFinder output from all 47 species
AT2G03110 No alias RNA binding;nucleic acid binding 0.02 OrthoFinder output from all 47 species
AT5G15270 No alias RNA-binding KH domain-containing protein 0.04 OrthoFinder output from all 47 species
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g022420 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g058992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g074054 HEN4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g075813 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g15857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0194.g057204 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Dac_g20278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g01553 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01021523001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031037001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os06g23460.1 LOC_Os06g23460 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
LOC_Os09g32300.1 LOC_Os09g32300 KH domain-containing protein HEN4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Ore_g03216 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g03833 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.01 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.01 OrthoFinder output from all 47 species
Solyc05g007810.3.1 Solyc05g007810 RNA-binding KH domain-containing protein RCF3... 0.01 OrthoFinder output from all 47 species
Solyc08g048500.3.1 Solyc08g048500 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 205 270
IPR004088 KH_dom_type_1 387 448
IPR004088 KH_dom_type_1 124 182
No external refs found!