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LOC_Os08g09880.1 (LOC_Os08g09880)


Aliases : LOC_Os08g09880

Description : Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica (sp|q6avi0|rsle2_orysj : 222.0)


Gene families : OG0005372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09880.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019943001 No alias Putative AC transposase OS=Zea mays 0.02 OrthoFinder output from all 47 species
LOC_Os03g38450.1 LOC_Os03g38450 Putative AC transposase OS=Zea mays (sp|p08770|tra1_maize : 82.0) 0.04 OrthoFinder output from all 47 species
LOC_Os08g09810.1 LOC_Os08g09810 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os08g09840.1 LOC_Os08g09840 Zinc finger BED domain-containing protein RICESLEEPER 2... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 576 658
IPR025525 hAT-like_transposase_RNase-H 433 531
IPR003656 Znf_BED 54 98
No external refs found!