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  5. LOC_Os08g09420.1

LOC_Os08g09420.1 (LOC_Os08g09420)


Aliases : LOC_Os08g09420

Description : no hits & (original description: none)


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09420.1

Target Alias Description ECC score Gene Family Method Actions
AT4G03630 No alias RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g094464 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.06G086600.1 FBW2, Ceric.06G086600 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g01116 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Solyc08g013750.3.1 Solyc08g013750 F-box protein SKIP19 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g009050.3.1 FBW2, Solyc11g009050 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 158 202
No external refs found!