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  5. LOC_Os08g09240.1

LOC_Os08g09240.1 (ATG8C, LOC_Os08g09240)


Aliases : ATG8C, LOC_Os08g09240

Description : ATG8 autophagosome ubiquitin-fold protein


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09240.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g014045 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene20646.t1 ATG8F, Aspi01Gene20646 autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0221.g058729 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g47748 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g12879 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Pir_g51675 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g53440 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Sam_g18568 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Spa_g02744 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Spa_g25476 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!