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Aliases : PDF2, LOC_Os08g08820
Description : transcription factor (HD-ZIP IV)
Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g08820.2 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00094630 | EDT1, HDG11,... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00089530 | HDG5, HB-7,... | RNA biosynthesis.transcriptional activation.HB... | 0.06 | OrthoFinder output from all 47 species | |
| AT1G05230 | HDG2 | homeodomain GLABROUS 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT1G17920 | HDG12 | homeodomain GLABROUS 12 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G79840 | GL2 | HD-ZIP IV family of homeobox-leucine zipper protein with... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G04890 | PDF2 | protodermal factor 2 | 0.08 | OrthoFinder output from all 47 species | |
| AT4G21750 | ATML1 | Homeobox-leucine zipper family protein / lipid-binding... | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g006830 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057101 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g079201 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110417 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g117416 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g06757 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g23646 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25555 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05720 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07199 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27191 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62966 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g08452 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09754 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g14038 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene27628.t1 | ATML1, Aspi01Gene27628 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene57033.t1 | ATML1, Aspi01Gene57033 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g014154 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0042.g026870 | PDF2 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0064.g035524 | PDF2 | HD-ZIP IV-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0100.g044331 | PDF2 | HD-ZIP IV-type transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0131.g049156 | PDF2 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0301.g063735 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0591.g078757 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g01321 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g70526 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G070600.1 | PDF2, Ceric.12G070600 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G081600.1 | ATML1, Ceric.18G081600 | HD-ZIP IV-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.1Z101600.1 | PDF2, Ceric.1Z101600 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z119300.1 | HDG2, Ceric.1Z119300 | HD-ZIP IV-type transcription factor & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.29G064400.1 | ATML1, Ceric.29G064400 | HD-ZIP IV-type transcription factor & original... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.38G046700.1 | PDF2, Ceric.38G046700 | HD-ZIP IV-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03815 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08292 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11376 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g13002 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15268 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g15269 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g20177 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g05023 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g13320 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g15559 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012643001 | PDF2 | RNA biosynthesis.transcriptional activation.HB... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01029396001 | EDT1, HDG11, ATHDG11 | RNA biosynthesis.transcriptional activation.HB... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01030605001 | HDG2 | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_18862 | PDF2 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g11571 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g37632 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g46600 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10318273g0010 | HDG2 | transcription factor (HD-ZIP IV) | 0.05 | OrthoFinder output from all 47 species | |
| MA_10426189g0030 | HDG2 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| MA_110607g0010 | PDF2 | transcription factor (HD-ZIP IV) | 0.04 | OrthoFinder output from all 47 species | |
| MA_122121g0010 | PDF2 | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| MA_17048g0010 | HDG5, HB-7 | transcription factor (HD-ZIP IV) | 0.05 | OrthoFinder output from all 47 species | |
| MA_483958g0010 | ATML1 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8859629g0010 | PDF2 | transcription factor (HD-ZIP IV) | 0.09 | OrthoFinder output from all 47 species | |
| MA_93471g0010 | ANL2, AHDP | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13220 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13845 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g19174 | EDT1, HDG11, ATHDG11 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25620 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g11364 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08965 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g17562 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005253 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0235.g026541 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12326 | No alias | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo403927 | PDF2 | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g120620.3.1 | GL2, Solyc03g120620 | transcription factor (HD-ZIP IV) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g072310.3.1 | EDT1, HDG11,... | transcription factor (HD-ZIP IV) | 0.14 | OrthoFinder output from all 47 species | |
| Solyc08g076370.3.1 | HDG5, HB-7,... | transcription factor (HD-ZIP IV) | 0.1 | OrthoFinder output from all 47 species | |
| Solyc10g005330.3.1 | PDF2, Solyc10g005330 | transcription factor (HD-ZIP IV) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g06195 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07168 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16174 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g46298 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g47125 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50253 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g51145 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e002453_P001 | HDG5, HB-7,... | transcription factor (HD-ZIP IV) | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e006870_P004 | HDG2, Zm00001e006870 | transcription factor (HD-ZIP IV) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e015997_P002 | EDT1, HDG11,... | transcription factor (HD-ZIP IV) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e017088_P001 | HDG1, HD-GL2-1,... | transcription factor (HD-ZIP IV) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e021649_P002 | PDF2, Zm00001e021649 | transcription factor (HD-ZIP IV) | 0.16 | OrthoFinder output from all 47 species | |
| Zm00001e023786_P003 | EDT1, HDG11,... | transcription factor (HD-ZIP IV) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e034755_P001 | HDG1, HD-GL2-1,... | transcription factor (HD-ZIP IV) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e036212_P002 | EDT1, HDG11,... | transcription factor (HD-ZIP IV) | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e039947_P001 | HDG2, Zm00001e039947 | transcription factor (HD-ZIP IV) | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e040312_P001 | PDF2, Zm00001e040312 | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041695_P001 | PDF2, Zm00001e041695 | transcription factor (HD-ZIP IV) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e042218_P002 | HDG2, Zm00001e042218 | transcription factor (HD-ZIP IV) | 0.11 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0008289 | lipid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |