LOC_Os08g43640 (Os08g0550100)


Aliases : Os08g0550100

Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom EMBRYO DEFECTIVE 2719 (EMB2719)


Gene families : OG_01_0004451 (Gene family) Phylogenetic Tree(s): OG0004451_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g43640
Cluster HCCA cluster: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
AT1G75990 No alias PAM domain (PCI/PINT associated module) protein 0.08 Gene family
Cpa|evm.model.tig00020614.5 No alias No description available 0.1 Gene family
Cre06.g275650 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.12 Gene family
MA_8584g0010 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
Solyc01g111710.3.1 Solyc01g111710.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.09 Gene family
Zm00001d032010 GRMZM2G119761 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.14 Gene family
Zm00001d053232 GRMZM2G180578 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.14 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEA InterProScan
MF GO:0030234 enzyme regulator activity IEA InterProScan
BP GO:0042176 regulation of protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013586 26S_Psome_reg_C 419 485
IPR000717 PCI_dom 310 415
No external refs found!