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  5. LOC_Os08g06480.1

LOC_Os08g06480.1 (TPR1, LOC_Os08g06480)


Aliases : TPR1, LOC_Os08g06480

Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g06480.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g05875 TPL, WSIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08987 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Aev_g32979 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aop_g06966 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene45821.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Cba_g27134 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G074400.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g16067 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g20506 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07917 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g08671 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g25643 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017487001 TPL, WSIP1 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
Len_g18450 TPR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35793 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
MA_16979g0010 TPL, WSIP1 Protein TPR3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_8901047g0010 TPR2 Topless-related protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g17410.1 TPR1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Msp_g36019 TPR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38873 TPR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40005 TPL, WSIP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56913 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g008040.4.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species
Solyc08g076030.3.1 TPL, WSIP1,... transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Spa_g17156 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Spa_g26507 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Spa_g37629 TPL, WSIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06694 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g28252 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e040187_P001 TPR1, Zm00001e040187 transcriptional repressor (TPL). transcriptional... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 446 483
IPR001680 WD40_repeat 919 951
No external refs found!