Aliases : ELF7, LOC_Os08g06070
Description : component ELF7/PAF1 of PAF1C transcription initiation and elongation complex
Gene families : OG0004313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004313_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g06070.1 | |
Cluster | HCCA: Cluster_143 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g017539 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g056601 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g074113 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g09992 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g520250 | ELF7 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g23418 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03648 | ELF7 | component ELF7/PAF1 of PAF1C transcription initiation... | 0.03 | OrthoFinder output from all 47 species | |
Len_g14682 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.06 | OrthoFinder output from all 47 species | |
MA_129211g0010 | ELF7 | component ELF7/PAF1 of PAF1C transcription initiation... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12595 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.02 | OrthoFinder output from all 47 species | |
Smo441016 | ELF7 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g121020.3.1 | ELF7, Solyc03g121020 | component ELF7/PAF1 of PAF1C transcription initiation... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02157 | ELF7 | component *(ELF7/PAF1) of PAF1C transcription initiation... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021730_P001 | ELF7, Zm00001e021730 | component ELF7/PAF1 of PAF1C transcription initiation... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e040227_P001 | ELF7, Zm00001e040227 | component ELF7/PAF1 of PAF1C transcription initiation... | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEA | Interproscan |
BP | GO:0016570 | histone modification | IEA | Interproscan |
CC | GO:0016593 | Cdc73/Paf1 complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007133 | RNA_pol_II-assoc_Paf1 | 62 | 385 |
No external refs found! |