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  5. LOC_Os08g05250.1

LOC_Os08g05250.1 (LOC_Os08g05250)


Aliases : LOC_Os08g05250

Description : no hits & (original description: none)


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g05250.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene33064.t1 Aspi01Gene33064 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17806 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.22 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.57 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.5 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.52 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 OrthoFinder output from all 47 species
LOC_Os09g02520.1 LOC_Os09g02520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g16459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 1252 1410
IPR005162 Retrotrans_gag_dom 441 515
No external refs found!