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  5. LOC_Os08g04450.3

LOC_Os08g04450.3 (LOC_Os08g04450)


Aliases : LOC_Os08g04450

Description : RNA editing factor (MORF)


Gene families : OG0008097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g04450.3
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00203580 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_32072 No alias RNA editing factor (MORF) 0.02 OrthoFinder output from all 47 species
Lfl_g21778 No alias RNA editing factor *(MORF) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g24456 No alias RNA editing factor *(MORF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079770.3.1 Solyc02g079770 RNA editing factor (MORF) 0.04 OrthoFinder output from all 47 species
Zm00001e041577_P001 Zm00001e041577 RNA editing factor (MORF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA

No InterPro domains available for this sequence

No external refs found!