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Aliases : LOC_Os08g03270
Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 127.0)
Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g03270.1 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00148p00068590 | evm_27.TU.AmTr_v1... | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AT1G08050 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT3G54780 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G49665 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g021972 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18978 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13092 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46085.t1 | Aspi01Gene46085 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0064.g035638 | No alias | not classified & original description: CDS=1-2802 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g23778 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G060200.1 | Ceric.09G060200 | not classified & original description: pacid=50588484... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G014600.1 | Ceric.24G014600 | not classified & original description: pacid=50629291... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G014900.1 | Ceric.37G014900 | not classified & original description: pacid=50616887... | 0.02 | OrthoFinder output from all 47 species | |
| ChrSy.fgenesh.mRNA.71 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g500550 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32441 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g38041 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50945 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g10552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_01603 | No alias | ubiquitin protein ligase (WAV3) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g42980.1 | LOC_Os04g42980 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g05990.1 | LOC_Os06g05990 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os10g32740.1 | LOC_Os10g32740 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_11225g0010 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_218345g0010 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24649 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007353 | No alias | not classified & original description: CDS=1-2007 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14357 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14647 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g38756 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g50317 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000344_P001 | Zm00001e000344 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e004621_P001 | Zm00001e004621 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e010994_P001 | Zm00001e010994 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012729_P001 | Zm00001e012729 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016170_P004 | Zm00001e016170 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040514_P001 | Zm00001e040514 | ubiquitin protein ligase (WAV3) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041206_P001 | Zm00001e041206 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |