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  5. LOC_Os08g02380.1

LOC_Os08g02380.1 (LOC_Os08g02380)


Aliases : LOC_Os08g02380

Description : motor protein (Kinesin-1)


Gene families : OG0000122 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g02380.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00035500 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.Kinesin... 0.04 OrthoFinder output from all 47 species
AT2G36200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Adi_g018963 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12862 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05771 ZCF125 Kinesin-7-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20723 No alias Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61402.t1 Aspi01Gene61402 Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G061300.1 Ceric.21G061300 Kinesin-7-type motor protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G001100.1 POK1, Ceric.33G001100 Kinesin-12-type motor protein & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000145.4 POK2 Kinesin-like protein KIN-12D OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000367.13 No alias Kinesin-like protein KIN-1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.148 No alias Cytoskeleton.microtubular network.Kinesin... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.64 No alias Kinesin-like protein KIN-5B OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g01907 No alias Kinesin-5-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12368 POK2 Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22010 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22162 POK2 Kinesin-like protein KIN-12F OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Gb_41072 PAKRP1L, KINESIN-12B motor protein (Kinesin-12) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39980.1 POK2, LOC_Os12g39980 phragmoplast integrity regulator (Kinesin-12). motor... 0.03 OrthoFinder output from all 47 species
Len_g01395 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08655 POK2 Kinesin-12-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15475 No alias Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37000 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57483 PAKRP1, KINESIN-12A Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12628 No alias Kinesin-5-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12828 PAKRP1, KINESIN-12A Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36941 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10417 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42752 POK1 Kinesin-12-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14045 ZCF125 Kinesin-7-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62895 POK2 Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023930 No alias Kinesin-7-type motor protein & original description: CDS=1-2340 0.03 OrthoFinder output from all 47 species
Smo403524 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g040110.3.1 Solyc04g040110 motor protein (Kinesin-7) 0.06 OrthoFinder output from all 47 species
Solyc04g077540.4.1 ZCF125, Solyc04g077540 Kinesin-like protein KIN-7N OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g010060.3.1 Solyc09g010060 motor protein (Kinesin-5) 0.04 OrthoFinder output from all 47 species
Spa_g43424 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004919_P001 Zm00001e004919 motor protein (Kinesin-12) 0.03 OrthoFinder output from all 47 species
Zm00001e005691_P001 Zm00001e005691 phragmoplast integrity regulator (Kinesin-12). motor... 0.02 OrthoFinder output from all 47 species
Zm00001e018006_P002 POK2, Zm00001e018006 phragmoplast integrity regulator (Kinesin-12). motor... 0.05 OrthoFinder output from all 47 species
Zm00001e029532_P001 Zm00001e029532 motor protein (Kinesin-5) 0.03 OrthoFinder output from all 47 species
Zm00001e035665_P003 POK1, Zm00001e035665 phragmoplast integrity regulator (Kinesin-12). motor... 0.04 OrthoFinder output from all 47 species
Zm00001e040681_P003 PAKRP1L,... motor protein (Kinesin-12) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 9 330
No external refs found!