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  5. LOC_Os08g01160.1

LOC_Os08g01160.1 (LOC_Os08g01160)


Aliases : LOC_Os08g01160

Description : Casparian strip membrane protein 2 OS=Oryza sativa subsp. japonica (sp|q6z1y7|casp2_orysj : 360.0)


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g01160.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.06 OrthoFinder output from all 47 species
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.07 OrthoFinder output from all 47 species
AMTR_s00057p00158850 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.07 OrthoFinder output from all 47 species
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.03 OrthoFinder output from all 47 species
AT1G03700 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT1G14160 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT2G27370 No alias Uncharacterised protein family (UPF0497) 0.08 OrthoFinder output from all 47 species
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.07 OrthoFinder output from all 47 species
AT3G11550 No alias Uncharacterised protein family (UPF0497) 0.09 OrthoFinder output from all 47 species
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.08 OrthoFinder output from all 47 species
AT5G15290 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
LOC_Os01g13560.1 LOC_Os01g13560 CASP-like protein 1C1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os02g36845.1 LOC_Os02g36845 Casparian strip membrane protein 7 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os05g15630.1 LOC_Os05g15630 CASP-like protein BLE3 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
MA_1041g0010 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.06 OrthoFinder output from all 47 species
MA_3155878g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.04 OrthoFinder output from all 47 species
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
MA_64798g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.04 OrthoFinder output from all 47 species
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
MA_90653g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.04 OrthoFinder output from all 47 species
MA_94788g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Mp3g16500.1 No alias CASP-like protein 1U1 OS=Marchantia polymorpha... 0.02 OrthoFinder output from all 47 species
Pir_g23305 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g067190.4.1 Solyc02g067190 Casparian strip membrane protein 1 OS=Solanum tuberosum... 0.1 OrthoFinder output from all 47 species
Solyc04g005620.3.1 Solyc04g005620 Casparian strip membrane protein 2 OS=Solanum demissum... 0.06 OrthoFinder output from all 47 species
Solyc06g074230.3.1 Solyc06g074230 Casparian strip membrane protein 2 OS=Triphysaria... 0.06 OrthoFinder output from all 47 species
Solyc09g010200.4.1 Solyc09g010200 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.07 OrthoFinder output from all 47 species
Solyc10g083250.2.1 Solyc10g083250 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Zm00001e006491_P001 Zm00001e006491 Casparian strip membrane protein 2 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e015806_P001 Zm00001e015806 Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.05 OrthoFinder output from all 47 species
Zm00001e021080_P001 Zm00001e021080 CASP-like protein 1U4 OS=Sorghum bicolor... 0.02 OrthoFinder output from all 47 species
Zm00001e024279_P001 Zm00001e024279 Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.04 OrthoFinder output from all 47 species
Zm00001e026902_P001 Zm00001e026902 CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.02 OrthoFinder output from all 47 species
Zm00001e036094_P001 Zm00001e036094 Casparian strip membrane protein 1 OS=Zea mays... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006702 CASP_dom 70 216
No external refs found!