LOC_Os08g43120 (Os08g0544400)


Aliases : Os08g0544400

Description : 34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 11 (PDR11)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g43120
Cluster HCCA cluster: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.03 Gene family
GSVIVT01017202001 No alias 34.16 transport.ABC transporters and multidrug... 0.06 Gene family
GSVIVT01034748001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01035715001 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
LOC_Os01g42350 Os01g0609000 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os07g33780 Os07g0522500 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os09g16449 Os09g0333500 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
MA_10433422g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_124091g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_12965g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_184352g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_949447g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Smo235359 PACid_15405313 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo417266 PACid_15402308 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Smo429390 PACid_15416241 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Smo441717 PACid_15410131 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc05g018510.3.1 Solyc05g018510.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc06g065655.1.1 Solyc06g065655.1 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc06g065670.3.1 Solyc06g065670.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d009037 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d021647 GRMZM2G415529 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d039631 GRMZM2G118243 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d043598 GRMZM2G000614 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d052726 GRMZM2G451792 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013581 PDR_assoc 626 690
IPR013525 ABC_2_trans 1049 1261
IPR013525 ABC_2_trans 410 621
IPR003439 ABC_transporter-like 751 902
IPR003439 ABC_transporter-like 103 255
No external refs found!