LOC_Os08g01040.1 (LOC_Os08g01040)

Aliases : LOC_Os08g01040

Description : ubiquitin ligase component Doa10 of ER-associated protein degradation (ERAD) machinery

Gene families : OG0001940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001940_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g01040.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g104776	No alias	E3 ubiquitin ligase component *(Doa10) of ER-associated...	0.02	OrthoFinder output from all 47 species
Aev_g21227	No alias	E3 ubiquitin ligase component *(Doa10) of ER-associated...	0.03	OrthoFinder output from all 47 species
Spa_g12254	No alias	E3 ubiquitin ligase component *(Doa10) of ER-associated...	0.04	OrthoFinder output from all 47 species
Spa_g19268	No alias	E3 ubiquitin ligase component *(Doa10) of ER-associated...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	30	76

External Links

No external refs found!