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  5. LOC_Os07g49250.1

LOC_Os07g49250.1 (LOC_Os07g49250)


Aliases : LOC_Os07g49250

Description : pyruvate decarboxylase


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g49250.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G008800.1 Ceric.23G008800 EC_4.1 carbon-carbon lyase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G029800.1 Ceric.39G029800 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g41262 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024702001 No alias Carbohydrate metabolism.fermentation.alcoholic... 0.04 OrthoFinder output from all 47 species
Solyc06g082130.3.1 Solyc06g082130 pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR011766 TPP_enzyme_TPP-bd 434 558
IPR012000 Thiamin_PyroP_enz_cen_dom 223 339
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 25 196
No external refs found!