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  5. LOC_Os07g49200.1

LOC_Os07g49200.1 (LOC_Os07g49200)


Aliases : LOC_Os07g49200

Description : CASP-like protein 4B1 OS=Oryza sativa subsp. japonica (sp|q84nq7|cspl4_orysj : 211.0)


Gene families : OG0003721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003721_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g49200.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G11655 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT5G40300 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
Aspi01Gene69560.t1 Aspi01Gene69560 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019832001 No alias CASP-like protein 4A4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc08g080560.3.1 Solyc08g080560 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e011777_P001 Zm00001e011777 CASP-like protein 4B3 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006702 CASP_dom 50 177
No external refs found!