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  5. LOC_Os07g48900.1

LOC_Os07g48900.1 (LOC_Os07g48900)


Aliases : LOC_Os07g48900

Description : transcription factor (bHLH)


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g48900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00143370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00044260 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G23995 No alias No description available 0.03 OrthoFinder output from all 47 species
AT2G43060 IBH1 ILI1 binding bHLH 1 0.05 OrthoFinder output from all 47 species
AT3G05800 AIF1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 0.04 OrthoFinder output from all 47 species
AT5G57780 No alias EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12... 0.03 OrthoFinder output from all 47 species
Aop_g03187 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G057100.1 AIF1, Ceric.04G057100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.16G049700.1 Ceric.16G049700 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
GSVIVT01023743001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g08220.1 LOC_Os02g08220 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_946997g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025428 No alias bHLH-type transcription factor & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species
Solyc01g079270.1.1 UPB1, Solyc01g079270 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e001479_P001 Zm00001e001479 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Zm00001e025908_P001 AIF1, Zm00001e025908 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e035917_P001 Zm00001e035917 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e041841_P001 Zm00001e041841 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!