LOC_Os07g48770.1 (LOC_Os07g48770)


Aliases : LOC_Os07g48770

Description : no hits & (original description: none)


Gene families : OG0000890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000890_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g48770.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g039630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04881 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g65150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05096.t1 Aspi01Gene05096 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07968.t1 Aspi01Gene07968 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54164.t2 Aspi01Gene54164 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57757.t1 Aspi01Gene57757 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G007300.1 Ceric.03G007300 not classified & original description: pacid=50571459... 0.02 OrthoFinder output from all 47 species
Ceric.10G038600.1 Ceric.10G038600 not classified & original description: pacid=50612378... 0.03 OrthoFinder output from all 47 species
Dac_g08567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g32073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003617001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01025834001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_39255 No alias Rhodanese-like domain-containing protein 6... 0.05 OrthoFinder output from all 47 species
Gb_39256 No alias Rhodanese-like domain-containing protein 6... 0.03 OrthoFinder output from all 47 species
Lfl_g06409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_2637g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g17540.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023969 No alias not classified & original description: CDS=329-1018 0.03 OrthoFinder output from all 47 species
Sam_g07779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo82287 No alias Rhodanese-like domain-containing protein 6... 0.05 OrthoFinder output from all 47 species
Solyc06g060570.3.1 Solyc06g060570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035911_P001 Zm00001e035911 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR005645 FSH_dom 5 197
No external refs found!