1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g47960.1

LOC_Os07g47960.1 (LOC_Os07g47960)


Aliases : LOC_Os07g47960

Description : no hits & (original description: none)


Gene families : OG0004823 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004823_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g47960.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00030410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.07 OrthoFinder output from all 47 species
AT3G56220 No alias transcription regulators 0.04 OrthoFinder output from all 47 species
Aop_g19521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22687.t1 Aspi01Gene22687 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25706.t1 Aspi01Gene25706 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024605001 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g006040.3.1 Solyc03g006040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g02758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001597_P001 Zm00001e001597 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038231_P001 Zm00001e038231 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!