LOC_Os07g46970.1 (LOC_Os07g46970)


Aliases : LOC_Os07g46970

Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia (sp|q94kl7|sild_forin : 212.0)


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g46970.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00244080 evm_27.TU.AmTr_v1... Tropinone reductase-like 1 OS=Erythroxylum coca 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00244570 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00056720 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G47120 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g081832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g52184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G056900.1 Ceric.08G056900 not classified & original description: pacid=50638438... 0.03 OrthoFinder output from all 47 species
Ceric.24G057200.1 Ceric.24G057200 not classified & original description: pacid=50629689... 0.03 OrthoFinder output from all 47 species
Dac_g38597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.04 OrthoFinder output from all 47 species
GSVIVT01024621001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032999001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033913001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033915001 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
GSVIVT01033916001 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
GSVIVT01036069001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_05034 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Gb_07847 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_13572 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32330 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_32338 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32339 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_36105 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_40683 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_41821 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os04g10000.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os04g10010.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46830.1 LOC_Os07g46830 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46910.1 LOC_Os07g46910 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.05 OrthoFinder output from all 47 species
LOC_Os07g46950.2 LOC_Os07g46950 Secoisolariciresinol dehydrogenase (Fragment)... 0.05 OrthoFinder output from all 47 species
Len_g38241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g42773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48178 SRE1, SIS4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10120560g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435071g0010 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_107740g0010 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_181810g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_2492g0010 No alias xanthoxin oxidase (ABA2) 0.02 OrthoFinder output from all 47 species
MA_308546g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_57399g0020 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
MA_903039g0010 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_954240g0010 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp1g17390.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Mp3g19140.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g24710.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Mp5g00680.1 No alias Short-chain dehydrogenase reductase 3c OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.02 OrthoFinder output from all 47 species
Msp_g28863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026192 No alias not classified & original description: CDS=60-1013 0.02 OrthoFinder output from all 47 species
Smo229892 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Solyc12g056600.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Solyc12g056610.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Solyc12g056700.2.1 Solyc12g056700 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc12g056710.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Spa_g22064 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e008424_P001 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e035437_P002 Zm00001e035437 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Zm00001e035788_P001 Zm00001e035788 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!