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  5. LOC_Os07g43970.1

LOC_Os07g43970.1 (LOC_Os07g43970)


Aliases : LOC_Os07g43970

Description : IQ domain-containing protein IQM2 OS=Arabidopsis thaliana (sp|q9lhn9|iqm2_arath : 506.0)


Gene families : OG0002150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43970.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00141380 evm_27.TU.AmTr_v1... IQ domain-containing protein IQM2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G13600 No alias calmodulin-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G33050 EDA39 calmodulin-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G57010 No alias calmodulin-binding family protein 0.03 OrthoFinder output from all 47 species
Ala_g08162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015178001 No alias IQ domain-containing protein IQM4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01025434001 No alias IQ domain-containing protein IQM2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_01832 No alias IQ domain-containing protein IQM6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_10224 No alias IQ domain-containing protein IQM2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os01g38980.1 EDA39, LOC_Os01g38980 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os05g10840.2 LOC_Os05g10840 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_50509g0010 No alias IQ domain-containing protein IQM6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g005800.3.1 Solyc01g005800 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc07g040710.3.1 Solyc07g040710 IQ domain-containing protein IQM1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc10g085610.2.1 Solyc10g085610 IQ domain-containing protein IQM3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc12g008960.2.1 Solyc12g008960 IQ domain-containing protein IQM1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Zm00001e020488_P001 Zm00001e020488 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e031286_P002 Zm00001e031286 IQ domain-containing protein IQM5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e038131_P002 Zm00001e038131 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!