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  5. LOC_Os07g43890.1

LOC_Os07g43890.1 (LOC_Os07g43890)


Aliases : LOC_Os07g43890

Description : p24-delta COPI trafficking regulator protein


Gene families : OG0001151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43890.1

Target Alias Description ECC score Gene Family Method Actions
AT1G57620 No alias emp24/gp25L/p24 family/GOLD family protein 0.09 OrthoFinder output from all 47 species
AT1G69460 No alias emp24/gp25L/p24 family/GOLD family protein 0.04 OrthoFinder output from all 47 species
Adi_g011270 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Adi_g117730 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Ala_g06317 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Aspi01Gene04322.t1 Aspi01Gene04322 component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000821.8 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dac_g01278 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Dac_g03551 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Dde_g15697 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
MA_10042785g0010 No alias p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species
Msp_g10335 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Pir_g02718 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Solyc01g010940.3.1 Solyc01g010940 p24-delta COPI trafficking regulator protein 0.04 OrthoFinder output from all 47 species
Solyc05g013130.3.1 Solyc05g013130 p24-delta COPI trafficking regulator protein 0.03 OrthoFinder output from all 47 species
Solyc11g013000.2.1 Solyc11g013000 p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e010842_P001 Zm00001e010842 p24-delta COPI trafficking regulator protein 0.06 OrthoFinder output from all 47 species
Zm00001e030800_P001 Zm00001e030800 p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR009038 GOLD_dom 37 225
No external refs found!