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  5. LOC_Os07g43670.1

LOC_Os07g43670.1 (ATRNS1, RNS1, LOC_Os07g43670)


Aliases : ATRNS1, RNS1, LOC_Os07g43670

Description : Ribonuclease 1 OS=Arabidopsis thaliana (sp|p42813|rns1_arath : 213.0)


Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43670.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262550 evm_27.TU.AmTr_v1... Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AMTR_s00064p00083000 ATRNS1, RNS1,... Ribonuclease 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G14210 No alias Ribonuclease T2 family protein 0.03 OrthoFinder output from all 47 species
Als_g46642 No alias T2-type RNase *(RNS) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g15509 No alias T2-type RNase *(RNS) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18235 No alias T2-type RNase *(RNS) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_27893 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_30835 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_30836 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os09g36700.1 LOC_Os09g36700 Ribonuclease 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10433186g0010 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_4032367g0010 RNS3 Ribonuclease 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_95383g0020 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Smo270532 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
Smo407198 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g005640.3.1 Solyc04g005640 Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc05g007940.3.1 ATRNS1, RNS1,... Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc05g007950.4.1 ATRNS1, RNS1,... Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 23 239
No external refs found!