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  5. LOC_Os07g42860.1

LOC_Os07g42860.1 (ATCYCD2;1, CYCD2;1,...)


Aliases : ATCYCD2;1, CYCD2;1, LOC_Os07g42860

Description : cyclin (CYCD)


Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g42860.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00066200 ATCYCD2;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
AMTR_s00164p00026810 ATCYCD2;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035662 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.31G027000.1 CYCD3;3, Ceric.31G027000 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dac_g05650 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dcu_g03868 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01003610001 ATCYCD2;1, CYCD2;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 OrthoFinder output from all 47 species
LOC_Os09g02360.1 CYCD3;3, LOC_Os09g02360 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
MA_17738g0010 CYCD3;3 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Nbi_g07526 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g37998 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g04462 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Ppi_g11937 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Sam_g14687 No alias regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Spa_g11128 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g28868 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Zm00001e020929_P001 CYCD7;1, CYCD7,... cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Zm00001e034405_P005 ATCYCD2;1,... cyclin (CYCD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006671 Cyclin_N 66 194
IPR004367 Cyclin_C-dom 197 294
No external refs found!