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  5. LOC_Os07g42500.1

LOC_Os07g42500.1 (LOC_Os07g42500)


Aliases : LOC_Os07g42500

Description : no hits & (original description: none)


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g42500.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g08723 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Aop_g03524 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Aop_g07737 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ehy_g22381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_38623 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g09436 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 148 213
IPR007461 Ysc84_actin-binding 330 455
No external refs found!