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  5. LOC_Os07g41580.1

LOC_Os07g41580.1 (NF-YB3, LOC_Os07g41580)


Aliases : NF-YB3, LOC_Os07g41580

Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g41580.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00239530 NF-YB3,... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00202310 NF-YB5,... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
AT5G47670 NF-YB6, L1L nuclear factor Y, subunit B6 0.03 OrthoFinder output from all 47 species
Adi_g020741 NF-YB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021371 NF-YB8 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Aev_g04826 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Als_g56322 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aop_g10676 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
Aop_g70431 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene41539.t1 NF-YB3, Aspi01Gene41539 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ceric.18G000500.1 NF-YB3, Ceric.18G000500 component *(NF-YB) of NF-Y transcription factor complex... 0.07 OrthoFinder output from all 47 species
GSVIVT01002895001 NF-YB6, L1L RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
GSVIVT01014673001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 OrthoFinder output from all 47 species
GSVIVT01014690001 NF-YB6, L1L RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
GSVIVT01022214001 NF-YB3 RNA biosynthesis.transcriptional activation.NF-Y... 0.08 OrthoFinder output from all 47 species
Gb_07866 NF-YB3 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Msp_g09416 NF-YB2 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Msp_g09968 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Nbi_g04631 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ore_g22868 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Pnu_g04888 NF-YB6, L1L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10547 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Sam_g07510 No alias component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Solyc09g074760.1.1 NF-YB5, Solyc09g074760 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Spa_g12787 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Spa_g54879 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Zm00001e001980_P001 NF-YB3, Zm00001e001980 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Zm00001e010728_P001 NF-YB3, Zm00001e010728 component NF-YB of NF-Y transcription factor complex 0.08 OrthoFinder output from all 47 species
Zm00001e015700_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e021676_P001 NF-YB3, Zm00001e021676 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e035517_P001 NF-YB3, Zm00001e035517 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 26 90
No external refs found!