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  5. LOC_Os07g41120.1

LOC_Os07g41120.1 (GR-RBP3, LOC_Os07g41120)


Aliases : GR-RBP3, LOC_Os07g41120

Description : RNA editing factor (ORRM)


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g41120.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g016820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01139 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g08805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G013000.1 GR-RBP3, Ceric.35G013000 RNA editing factor *(ORRM3) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g30417 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12936g0020 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.05 OrthoFinder output from all 47 species
Pir_g03416 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04318 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30959 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo81392 GRP2, ATGRP2, GR-RBP2 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 33 102
No external refs found!