LOC_Os07g39620.2 (LOC_Os07g39620)


Aliases : LOC_Os07g39620

Description : no hits & (original description: none)


Gene families : OG0001915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001915_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g39620.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00140570 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G50570 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Adi_g008300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44372.t1 Aspi01Gene44372 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54480.t1 Aspi01Gene54480 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71693.t1 Aspi01Gene71693 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_19856g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_2272g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g11381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g07478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005844 No alias not classified & original description: CDS=453-2159 0.02 OrthoFinder output from all 47 species
Smo227148 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc07g065230.1.1 Solyc07g065230 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g42026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035392_P001 Zm00001e035392 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 27 126
No external refs found!