LOC_Os07g39430.1 (LOC_Os07g39430)

Aliases : LOC_Os07g39430

Description : transcription factor (mTERF)

Gene families : OG0007385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g39430.1
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
AT5G55580	No alias	Mitochondrial transcription termination factor family protein	0.08	OrthoFinder output from all 47 species
Aop_g07725	No alias	ribosome biogenesis factor *(mTERF9)) & original...	0.04	OrthoFinder output from all 47 species
Dde_g08858	No alias	ribosome biogenesis factor *(mTERF9)) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01037780001	No alias	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
Len_g19721	No alias	ribosome biogenesis factor *(mTERF9)) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g12364	No alias	ribosome biogenesis factor *(mTERF9)) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g02140	No alias	ribosome biogenesis factor *(mTERF9)) & original...	0.05	OrthoFinder output from all 47 species
Sam_g06286	No alias	ribosome biogenesis factor *(mTERF9)) & original...	0.02	OrthoFinder output from all 47 species
Solyc12g015640.2.1	Solyc12g015640	transcription factor (mTERF)	0.07	OrthoFinder output from all 47 species
Tin_g09512	No alias	ribosome biogenesis factor *(mTERF9)) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e010645_P002	Zm00001e010645	transcription factor (mTERF)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	189	302
IPR003690	MTERF	256	460

External Links

No external refs found!