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  5. LOC_Os07g38890.1

LOC_Os07g38890.1 (GH3.1, LOC_Os07g38890)


Aliases : GH3.1, LOC_Os07g38890

Description : Probable indole-3-acetic acid-amido synthetase GH3.9 OS=Oryza sativa subsp. japonica (sp|q6zla3|gh39_orysj : 880.0)


Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38890.1

Target Alias Description ECC score Gene Family Method Actions
AT5G13320 GH3.12, PBS3, WIN3, GDG1 Auxin-responsive GH3 family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene06626.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06627.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
MA_10432413g0020 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.02 OrthoFinder output from all 47 species
MA_10434772g0010 DFL1, GH3.6 indole-3-acetic acid-amido synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 2 410
No external refs found!