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  5. LOC_Os07g38730.1

LOC_Os07g38730.1 (TUA3, LOC_Os07g38730)


Aliases : TUA3, LOC_Os07g38730

Description : component alpha-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38730.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254750 TOR2, TUA4,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.07 OrthoFinder output from all 47 species
AT1G50010 TUA2 tubulin alpha-2 chain 0.06 OrthoFinder output from all 47 species
AT1G64740 TUA1 alpha-1 tubulin 0.03 OrthoFinder output from all 47 species
AT4G14960 TUA6 Tubulin/FtsZ family protein 0.1 OrthoFinder output from all 47 species
AT5G19770 TUA3 tubulin alpha-3 0.08 OrthoFinder output from all 47 species
AT5G19780 TUA5 tubulin alpha-5 0.06 OrthoFinder output from all 47 species
Adi_g017319 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Adi_g017320 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Adi_g017321 TUA6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g088317 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Adi_g088318 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Adi_g102765 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Aev_g21297 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ala_g04079 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ala_g05902 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ala_g16980 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ala_g31827 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g06169 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g07261 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Als_g08220 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g10639 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Als_g47452 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Als_g57469 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Aob_g07816 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g19223 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g60213 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aop_g62975 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g70011 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04513.t1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19402.t1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72780.t1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Azfi_s0243.g059892 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Cba_g11710 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Cba_g15077 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Cba_g15078 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Cba_g19776 TUA3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33861 TOR2, TUA4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G074000.1 TUA6, Ceric.06G074000 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ceric.09G076600.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.12G037900.1 TUA3, Ceric.12G037900 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Ceric.21G070800.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Ceric.24G052000.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ceric.25G032200.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Cre04.g216850 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dac_g12327 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Dac_g14622 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g22398 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g22562 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g33398 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g09742 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g14320 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dcu_g17258 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Dde_g24024 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dde_g26003 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ehy_g16456 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
GSVIVT01009258001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
GSVIVT01011382001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
GSVIVT01025462001 TUA3 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
GSVIVT01033415001 TUA3 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
GSVIVT01037046001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Gb_00907 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Gb_02715 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Gb_07962 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Len_g12227 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Len_g12228 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Len_g26529 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Lfl_g23976 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Lfl_g23977 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
MA_184192g0010 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
MA_273360g0010 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
Mp2g23500.1 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp4g00550.1 TUA3 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
Msp_g07903 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Msp_g07905 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g17277 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Msp_g24914 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g29758 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Msp_g36320 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Nbi_g06679 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ore_g03977 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ore_g28972 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Pir_g02520 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pir_g03063 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pir_g29325 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pnu_g10754 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pnu_g22843 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Pp3c25_1010V3.1 TUA3, Pp3c25_1010 tubulin alpha-5 0.01 OrthoFinder output from all 47 species
Ppi_g11595 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ppi_g13625 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ppi_g14945 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Ppi_g28726 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ppi_g35812 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g09230 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g09431 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sam_g16657 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g16658 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g16660 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Sam_g35588 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sam_g35589 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo178975 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Smo227365 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Smo230143 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo233518 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g04259 TOR2, TUA4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04260 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Spa_g04277 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Spa_g05097 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Spa_g05098 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Spa_g07521 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g17285 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g26077 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g26675 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g26820 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Spa_g47009 TUA6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g57342 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g02677 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Tin_g05549 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Tin_g09529 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Tin_g21555 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Zm00001e011939_P002 TUA6, Zm00001e011939 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Zm00001e035332_P001 TUA3, Zm00001e035332 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!