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  5. LOC_Os07g38610.1

LOC_Os07g38610.1 (LOC_Os07g38610)


Aliases : LOC_Os07g38610

Description : nucleotide sugar transporter (CSTLP)


Gene families : OG0002704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38610.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00059360 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.02 OrthoFinder output from all 47 species
Aev_g11328 No alias nucleotide sugar transporter *(CSTLP) & original... 0.02 OrthoFinder output from all 47 species
Als_g00756 No alias nucleotide sugar transporter *(CSTLP) & original... 0.02 OrthoFinder output from all 47 species
Aop_g01658 No alias nucleotide sugar transporter *(CSTLP) & original... 0.02 OrthoFinder output from all 47 species
Sam_g29622 No alias nucleotide sugar transporter *(CSTLP) & original... 0.03 OrthoFinder output from all 47 species
Solyc11g008590.2.1 Solyc11g008590 nucleotide sugar transporter (CSTLP) 0.04 OrthoFinder output from all 47 species
Spa_g07497 No alias nucleotide sugar transporter *(CSTLP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039848_P003 Zm00001e039848 nucleotide sugar transporter (CSTLP) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA Interproscan
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEA Interproscan
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR007271 Nuc_sug_transpt 49 347
No external refs found!