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  5. LOC_Os07g38470.1

LOC_Os07g38470.1 (LOC_Os07g38470)


Aliases : LOC_Os07g38470

Description : no hits & (original description: none)


Gene families : OG0001805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38470.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00032310 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G48330 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Aspi01Gene39090.t1 Aspi01Gene39090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67442.t1 Aspi01Gene67442 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G063600.1 Ceric.14G063600 not classified & original description: pacid=50634019... 0.02 OrthoFinder output from all 47 species
Ceric.21G038800.1 Ceric.21G038800 not classified & original description: pacid=50604262... 0.04 OrthoFinder output from all 47 species
Ceric.31G019500.1 Ceric.31G019500 not classified & original description: pacid=50573563... 0.05 OrthoFinder output from all 47 species
Ceric.37G002200.1 Ceric.37G002200 not classified & original description: pacid=50616623... 0.04 OrthoFinder output from all 47 species
Ceric.37G008300.1 Ceric.37G008300 not classified & original description: pacid=50616145... 0.04 OrthoFinder output from all 47 species
Dac_g06874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017965001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01021842001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_24695 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g51410.1 LOC_Os04g51410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g04680.1 LOC_Os05g04680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g053180.3.1 Solyc05g053180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g068620.3.1 Solyc06g068620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g015430.3.1 Solyc09g015430 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g52962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011985_P001 Zm00001e011985 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019638_P001 Zm00001e019638 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA

No InterPro domains available for this sequence

No external refs found!