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  5. LOC_Os07g37610.1

LOC_Os07g37610.1 (HSI2, VAL1, LOC_Os07g37610)


Aliases : HSI2, VAL1, LOC_Os07g37610

Description : transcription factor (LAV-VAL)


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g37610.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g103348 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G007100.1 HSL1, VAL2,... LAV-VAL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g07210 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g03700.1 HSL1, VAL2, HSI2-L1 transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species
Msp_g37184 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16375 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010979_P001 HSL1, VAL2,... transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species
Zm00001e035857_P002 HSL1, VAL2,... transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 713 755
IPR003340 B3_DNA-bd 453 552
No external refs found!