LOC_Os07g37140.1 (LOC_Os07g37140)


Aliases : LOC_Os07g37140

Description : histone demethylase (KDM3)


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g37140.1

Target Alias Description ECC score Gene Family Method Actions
AT1G62310 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g086369 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109477 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09074 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046016 No alias histone demethylase *(KDM3) & original description: CDS=2-3103 0.03 OrthoFinder output from all 47 species
Cba_g04079 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G069000.1 Ceric.11G069000 histone demethylase *(KDM3) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g12281 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25444 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.02 OrthoFinder output from all 47 species
Dcu_g41882 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07685 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17375 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31029 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g049140.4.1 IBM1, Solyc04g049140 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Zm00001e035224_P001 Zm00001e035224 histone demethylase (KDM3) 0.03 OrthoFinder output from all 47 species
Zm00001e038213_P003 Zm00001e038213 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR014977 WRC_dom 287 325
No external refs found!