1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g36940.1

LOC_Os07g36940.1 (CUM2, EIF4G, LOC_Os07g36940)


Aliases : CUM2, EIF4G, LOC_Os07g36940

Description : component eIF4G of eIF4F mRNA unwinding complex


Gene families : OG0001819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001819_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g36940.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00140630 CUM2, EIF4G,... Protein biosynthesis.translation initiation.mRNA... 0.06 OrthoFinder output from all 47 species
AT3G60240 CUM2, EIF4G No description available 0.04 OrthoFinder output from all 47 species
Adi_g017175 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Adi_g077949 CUM2, EIF4G not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29126 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Aob_g02409 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Cba_g35184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G035100.1 CUM2, EIF4G,... component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.06 OrthoFinder output from all 47 species
GSVIVT01018331001 CUM2, EIF4G Eukaryotic translation initiation factor 4G... 0.07 OrthoFinder output from all 47 species
Gb_05240 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.02 OrthoFinder output from all 47 species
Gb_34242 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.09 OrthoFinder output from all 47 species
MA_10434326g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_15224g0010 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.05 OrthoFinder output from all 47 species
Solyc01g088700.4.1 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.08 OrthoFinder output from all 47 species
Zm00001e010537_P001 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 1183 1406
IPR003891 Initiation_fac_eIF4g_MI 1604 1717
No external refs found!