LOC_Os07g33390.1 (LOC_Os07g33390)

Aliases : LOC_Os07g33390

Description : AAA-ATPase At3g50940 OS=Arabidopsis thaliana (sp|q147f9|aatpc_arath : 338.0)

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g33390.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00215810	evm_27.TU.AmTr_v1...	AAA-ATPase At5g57480 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Aob_g29710	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G071100.1	Ceric.19G071100	not classified & original description: pacid=50575396...	0.08	OrthoFinder output from all 47 species
Dcu_g01313	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os07g33380.1	LOC_Os07g33380	AAA-ATPase At5g17760 OS=Arabidopsis thaliana...	0.11	OrthoFinder output from all 47 species
MA_10150402g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.1	OrthoFinder output from all 47 species
MA_585362g0010	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022181	No alias	not classified & original description: CDS=1-984	0.03	OrthoFinder output from all 47 species
Zm00001e013139_P001	Zm00001e013139	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e034224_P001	Zm00001e034224	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	258	406
IPR025753	AAA_N_dom	45	151

External Links

No external refs found!