1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g32550.1

LOC_Os07g32550.1 (LOC_Os07g32550)


Aliases : LOC_Os07g32550

Description : rRNA adenosine dimethylase (DIM1B)


Gene families : OG0002989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g32550.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00244930 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
Aev_g04558 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63583 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14471 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00851 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018854001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
MA_40677g0020 No alias rRNA adenosine dimethylase (DIM1A). rRNA adenosine... 0.04 OrthoFinder output from all 47 species
Smo116036 No alias RNA processing.RNA modification.rRNA/tRNA... 0.05 OrthoFinder output from all 47 species
Solyc02g084730.3.1 Solyc02g084730 rRNA adenosine dimethylase (DIM1B) 0.06 OrthoFinder output from all 47 species
Tin_g06535 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 36 252
No external refs found!