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  5. LOC_Os07g30990.1

LOC_Os07g30990.1 (LOC_Os07g30990)


Aliases : LOC_Os07g30990

Description : Ubiquitin-40S ribosomal protein S27a-3 OS=Arabidopsis thaliana (sp|p59233|r27ac_arath : 93.2)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g30990.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Ala_g38104 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60566 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26709 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05002 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_46617g0010 UBQ11 Polyubiquitin (Fragment) OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Nbi_g44239 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26810 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25580 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60011 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g07363 No alias UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 73
No external refs found!