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  5. LOC_Os07g30670.1

LOC_Os07g30670.1 (NDF4, LOC_Os07g30670)


Aliases : NDF4, LOC_Os07g30670

Description : component PnsB3/NDF4 of NDH subcomplex B


Gene families : OG0003280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g30670.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00146830 NDF4,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
AT3G16250 NDF4 NDH-dependent cyclic electron flow 1 0.09 OrthoFinder output from all 47 species
Aev_g18850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0129.g048937 No alias not classified & original description: CDS=216-866 0.03 OrthoFinder output from all 47 species
Cba_g31443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G016600.1 Ceric.08G016600 not classified & original description: pacid=50638657... 0.02 OrthoFinder output from all 47 species
Dcu_g19341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017041001 NDF4 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.09 OrthoFinder output from all 47 species
GSVIVT01035716001 No alias Photosynthetic NDH subunit of subcomplex B 3,... 0.05 OrthoFinder output from all 47 species
Len_g57816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g083360.3.1 NDF4, Solyc08g083360 component PnsB3/NDF4 of NDH subcomplex B 0.06 OrthoFinder output from all 47 species
Zm00001e035003_P001 NDF4, Zm00001e035003 component PnsB3/NDF4 of NDH subcomplex B 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 138 186
No external refs found!