1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g29940.1

LOC_Os07g29940.1 (LOC_Os07g29940)


Aliases : LOC_Os07g29940

Description : no hits & (original description: none)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g29940.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT4G03450 No alias Ankyrin repeat family protein 0.05 OrthoFinder output from all 47 species
AT4G03460 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G14400 ACD6 ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g049952 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01001633001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01001639001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01001645001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01010731001 No alias Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
GSVIVT01013586001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01020517001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01020519001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01030371001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00335 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09218 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_26480 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os07g34780.1 XBAT33, LOC_Os07g34780 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os09g15950.1 LOC_Os09g15950 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
LOC_Os09g16760.1 LOC_Os09g16760 Ankyrin repeat-containing protein At2g01680... 0.01 OrthoFinder output from all 47 species
LOC_Os11g08020.1 LOC_Os11g08020 Ankyrin repeat-containing protein At2g01680... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14570.1 LOC_Os11g14570 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os11g15460.1 LOC_Os11g15460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g055970.4.1 Solyc05g055970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 67 139
IPR026961 PGG_dom 204 320
No external refs found!