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  5. LOC_Os07g29440.1

LOC_Os07g29440.1 (MAT1, AtSAM1, SAM1,...)


Aliases : MAT1, AtSAM1, SAM1, SAM-1, LOC_Os07g29440

Description : S-adenosyl methionine synthetase


Gene families : OG0000645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000645_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g29440.1

Target Alias Description ECC score Gene Family Method Actions
AT1G02500 MAT1, AtSAM1, SAM1, SAM-1 S-adenosylmethionine synthetase 1 0.03 OrthoFinder output from all 47 species
AT3G17390 SAMS3, MTO3, MAT4 S-adenosylmethionine synthetase family protein 0.02 OrthoFinder output from all 47 species
Aev_g06470 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aop_g12960 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aop_g18643 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aop_g26973 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aop_g26974 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ceric.23G071300.1 SAM2, MAT2,... EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dcu_g27683 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dcu_g46795 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ehy_g04841 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
GSVIVT01028205001 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.04 OrthoFinder output from all 47 species
Len_g14427 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Lfl_g02008 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Lfl_g18263 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Pir_g39910 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Smo155092 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.02 OrthoFinder output from all 47 species
Smo168213 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.02 OrthoFinder output from all 47 species
Zm00001e040353_P003 SAM2, MAT2,... S-adenosyl methionine synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEA Interproscan
BP GO:0006556 S-adenosylmethionine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022629 S-AdoMet_synt_central 119 162
IPR022628 S-AdoMet_synt_N 6 103
No external refs found!