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  5. LOC_Os07g28250.1

LOC_Os07g28250.1 (LOC_Os07g28250)


Aliases : LOC_Os07g28250

Description : GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana (sp|q680c0|gdl62_arath : 154.0)


Gene families : OG0000838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g28250.1

Target Alias Description ECC score Gene Family Method Actions
AT4G10955 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G24210 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G24230 No alias Lipase class 3-related protein 0.04 OrthoFinder output from all 47 species
Adi_g010517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08876.t1 Aspi01Gene08876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43665.t1 Aspi01Gene43665 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68810.t1 Aspi01Gene68810 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_11151 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_11156 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g34420.1 LOC_Os07g34420 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g00567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g18880.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g31183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_3400V3.1 Pp3c12_3400 Lipase class 3-related protein 0.02 OrthoFinder output from all 47 species
Solyc02g070610.3.1 Solyc02g070610 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g056250.3.1 Solyc07g056250 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028012_P001 Zm00001e028012 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!