LOC_Os07g25450.1 (ATSUVH2, SDG3, SUVH2,...)

Aliases : ATSUVH2, SDG3, SUVH2, LOC_Os07g25450

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation. SUVH2/9 methyl-DNA-binding factor of DNA methylation pathway

Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g25450.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00076340	SDG33, SUVH4,...	Enzyme classification.EC_2 transferases.EC_2.1...	0.02	OrthoFinder output from all 47 species
Ala_g09955	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aop_g13753	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Cba_g05945	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Dde_g10200	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
GSVIVT01013854001	SUVH5, SGD9	Chromatin organisation.histone modifications.histone...	0.03	OrthoFinder output from all 47 species
GSVIVT01032986001	SDG33, SUVH4, KYP	Chromatin organisation.histone modifications.histone...	0.02	OrthoFinder output from all 47 species
Gb_09748	SUVH1	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species
MA_22288g0010	SDG33, SUVH4, KYP	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species
Ore_g16001	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ore_g17339	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Ore_g19342	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ore_g35203	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Pp3c4_9720V3.1	SDG33, SUVH4,...	SU(VAR)3-9 homolog 4	0.01	OrthoFinder output from all 47 species
Sam_g06734	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Solyc03g093700.3.1	SDG23, SUVH6,...	class V/Su(var) histone methyltransferase component of...	0.04	OrthoFinder output from all 47 species
Zm00001e003855_P002	SET22, SDG22,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Zm00001e007370_P001	SUVH5, SGD9,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Zm00001e009735_P001	SUVH5, SGD9,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Zm00001e031994_P003	SUVH3, SDG19,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Zm00001e033937_P001	Zm00001e033937	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007728	Pre-SET_dom	423	522
IPR003105	SRA_YDG	239	392
IPR001214	SET_dom	541	673

External Links

No external refs found!

LOC_Os07g25450.1 (ATSUVH2, SDG3, SUVH2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation