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  5. LOC_Os07g23410.1

LOC_Os07g23410.1 (FAD2, LOC_Os07g23410)


Aliases : FAD2, LOC_Os07g23410

Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0001837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g23410.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Als_g50821 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Len_g14321 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Lfl_g26639 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Pnu_g15311 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32690 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Smo163663 FAD2 Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 OrthoFinder output from all 47 species
Solyc04g040120.1.1 FAD2, Solyc04g040120 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc04g040130.1.1 FAD2, Solyc04g040130 omega-3/omega-6 fatty acid desaturase 0.06 OrthoFinder output from all 47 species
Solyc12g045035.1.1 FAD2, Solyc12g045035 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc12g045037.1.1 FAD2, Solyc12g045037 omega-3/omega-6 fatty acid desaturase 0.03 OrthoFinder output from all 47 species
Solyc12g049030.1.1 FAD2, Solyc12g049030 omega-3/omega-6 fatty acid desaturase 0.06 OrthoFinder output from all 47 species
Solyc12g100250.3.1 FAD2, Solyc12g100250 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Zm00001e023386_P002 FAD2, Zm00001e023386 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Zm00001e039637_P001 FAD2, Zm00001e039637 omega-3/omega-6 fatty acid desaturase 0.08 OrthoFinder output from all 47 species
Zm00001e042261_P001 FAD2, Zm00001e042261 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021863 FAS_N 25 73
IPR005804 FA_desaturase_dom 92 354
No external refs found!